oracle
Bioinformatics Scientist
Quest Diagnostics
Baltimore, USA
Full-time
Senior · 5+ years experience
Hybrid
USD 80000-100000 yearly / year
Discovered 2 weeks ago
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Responsibilities
- Design, develop, and optimize bioinformatics pipelines for MRD test development and clinical deployment.
- Analyze high throughput NGS data and drive performance and scientific insights to support research and development of on-market and upcoming products.
- Collaborate with laboratory scientists, clinicians, and software engineers to validate and integrate bioinformatics solutions into clinical workflows.
- Apply software engineering best practices, contributing to the scalability, robustness, and maintainability of bioinformatics pipelines.
- Document and validate bioinformatics systems in compliance with regulatory and quality standards for clinical diagnostics.
- Stay current with advancements in oncology genomics, liquid biopsy, and computational biology methods to inform innovation and future product enhancement.
- Identify problems, investigate alternatives and recommend possible courses of action, contribute to technical decisions.
- Prepare and present information at project meetings, scientific & technical meetings/conferences, and to customers.
Qualifications
- Required Work Experience:
- 5+ years of hands-on experience analyzing NGS data
- Preferred Work Experience:
- Within oncology diagnostics.
- Physical and Mental Requirements:
- If applicable
- Knowledge:
- Proficiency in bioinformatics pipeline workflow management, particularly Nextflow (preferred), Cromwell, or CWL.
- Expertise developing pipelines for cloud-based computational environments (AWS, or similar).
- Demonstrated ability to work with regulated clinical or diagnostic environments (e.g., CLIA, CAP, or FDA submissions)
- Skills:
- Strong programming skills in Python, R, or similar scripting/data analysis languages.
- Strong logical reasoning skills, with desire to drive solutions for some of the most challenging problems in the field of oncology diagnostics.
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